Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Cellular Component Movement (GO:0006928) Genes Targeted by hsa-mir-29a in AD Lung Bhattacharjee Cluster 59 Table contains all genes in the AD Lung Bhattacharjee cluster number 59. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-29a GO:0006928 10631 POSTN periostin, osteoblast specific factor [Source:HGNC Symbol;Acc:16953] zzz999 9697 TRAM2 translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:16855] T 6464 SHC1 SHC (Src homology 2 domain containing) transforming protein 1 [Source:HGNC Symbol;Acc:10840] zzz999 Yes 3339 HSPG2 heparan sulfate proteoglycan 2 [Source:HGNC Symbol;Acc:5273] T 4237 MFAP2 microfibrillar-associated protein 2 [Source:HGNC Symbol;Acc:7033] zzz999 7169 TPM2 tropomyosin 2 (beta) [Source:HGNC Symbol;Acc:12011] zzz999 4240 MFGE8 milk fat globule-EGF factor 8 protein [Source:HGNC Symbol;Acc:7036] zzz999 54587 MXRA8 matrix-remodelling associated 8 [Source:HGNC Symbol;Acc:7542] zzz999 1513 CTSK cathepsin K [Source:HGNC Symbol;Acc:2536] zzz999 6678 SPARC secreted protein, acidic, cysteine-rich (osteonectin) [Source:HGNC Symbol;Acc:11219] T 8532 CPZ carboxypeptidase Z [Source:HGNC Symbol;Acc:2333] zzz999 1282 COL4A1 collagen, type IV, alpha 1 [Source:HGNC Symbol;Acc:2202] P 1301 COL11A1 collagen, type XI, alpha 1 [Source:HGNC Symbol;Acc:2186] P T 1009 CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) [Source:HGNC Symbol;Acc:1750] zzz999 1734 zzz999 zzz999 P T 5176 SERPINF1 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:HGNC Symbol;Acc:8824] zzz999 23452 ANGPTL2 angiopoietin-like 2 [Source:HGNC Symbol;Acc:490] zzz999 6320 CLEC11A C-type lectin domain family 11, member A [Source:HGNC Symbol;Acc:10576] zzz999 1292 COL6A2 collagen, type VI, alpha 2 [Source:HGNC Symbol;Acc:2212] zzz999 4854 NOTCH3 notch 3 [Source:HGNC Symbol;Acc:7883] zzz999 1462 VCAN versican [Source:HGNC Symbol;Acc:2464] zzz999 Yes 1281 COL3A1 collagen, type III, alpha 1 [Source:HGNC Symbol;Acc:2201] P 633 BGN biglycan [Source:HGNC Symbol;Acc:1044] zzz999 4320 MMP11 matrix metallopeptidase 11 (stromelysin 3) [Source:HGNC Symbol;Acc:7157] zzz999 1290 COL5A2 collagen, type V, alpha 2 [Source:HGNC Symbol;Acc:2210] P T 7070 THY1 Thy-1 cell surface antigen [Source:HGNC Symbol;Acc:11801] zzz999 Yes 165 AEBP1 AE binding protein 1 [Source:HGNC Symbol;Acc:303] zzz999 2200 FBN1 fibrillin 1 [Source:HGNC Symbol;Acc:3603] P T 2199 FBLN2 fibulin 2 [Source:HGNC Symbol;Acc:3601] zzz999 2191 FAP fibroblast activation protein, alpha [Source:HGNC Symbol;Acc:3590] zzz999 Yes 716 C1S complement component 1, s subcomponent [Source:HGNC Symbol;Acc:1247] zzz999 7058 THBS2 thrombospondin 2 [Source:HGNC Symbol;Acc:11786] zzz999 10474 TADA3 transcriptional adaptor 3 [Source:HGNC Symbol;Acc:19422] zzz999 57214 KIAA1199 KIAA1199 [Source:HGNC Symbol;Acc:29213] P T 813 CALU calumenin [Source:HGNC Symbol;Acc:1458] P T 1293 COL6A3 collagen, type VI, alpha 3 [Source:HGNC Symbol;Acc:2213] P T 10970 CKAP4 cytoskeleton-associated protein 4 [Source:HGNC Symbol;Acc:16991] zzz999 87 ACTN1 actinin, alpha 1 [Source:HGNC Symbol;Acc:163] zzz999 Yes 11117 EMILIN1 elastin microfibril interfacer 1 [Source:HGNC Symbol;Acc:19880] zzz999 3671 ISLR immunoglobulin superfamily containing leucine-rich repeat [Source:HGNC Symbol;Acc:6133] zzz999 4015 LOX lysyl oxidase [Source:HGNC Symbol;Acc:6664] zzz999 1278 COL1A2 collagen, type I, alpha 2 [Source:HGNC Symbol;Acc:2198] P T Yes 9645 MICAL2 microtubule associated monoxygenase, calponin and LIM domain containing 2 [Source:HGNC Symbol;Acc:24693] zzz999 131578 LRRC15 leucine rich repeat containing 15 [Source:HGNC Symbol;Acc:20818] zzz999 871 SERPINH1 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) [Source:HGNC Symbol;Acc:1546] zzz999 7168 TPM1 tropomyosin 1 (alpha) [Source:HGNC Symbol;Acc:12010] P T Yes 4082 MARCKS myristoylated alanine-rich protein kinase C substrate [Source:HGNC Symbol;Acc:6759] zzz999 3688 ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) [Source:HGNC Symbol;Acc:6153] P T Yes 3693 ITGB5 integrin, beta 5 [Source:HGNC Symbol;Acc:6160] zzz999 1300 COL10A1 collagen, type X, alpha 1 [Source:HGNC Symbol;Acc:2185] zzz999 5118 PCOLCE procollagen C-endopeptidase enhancer [Source:HGNC Symbol;Acc:8738] zzz999 2335 FN1 fibronectin 1 [Source:HGNC Symbol;Acc:3778] zzz999 Yes 11098 PRSS23 protease, serine, 23 [Source:HGNC Symbol;Acc:14370] zzz999 5654 HTRA1 HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:9476] zzz999 5159 PDGFRB platelet-derived growth factor receptor, beta polypeptide [Source:HGNC Symbol;Acc:8804] P T Yes 23213 SULF1 sulfatase 1 [Source:HGNC Symbol;Acc:20391] zzz999 392 ARHGAP1 Rho GTPase activating protein 1 [Source:HGNC Symbol;Acc:673] zzz999 25878 MXRA5 matrix-remodelling associated 5 [Source:HGNC Symbol;Acc:7539] zzz999 9891 NUAK1 NUAK family, SNF1-like kinase, 1 [Source:HGNC Symbol;Acc:14311] T 9260 PDLIM7 PDZ and LIM domain 7 (enigma) [Source:HGNC Symbol;Acc:22958] zzz999 1306 COL15A1 collagen, type XV, alpha 1 [Source:HGNC Symbol;Acc:2192] P 4016 LOXL1 lysyl oxidase-like 1 [Source:HGNC Symbol;Acc:6665] zzz999 4060 LUM lumican [Source:HGNC Symbol;Acc:6724] zzz999 3685 ITGAV integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51) [Source:HGNC Symbol;Acc:6150] zzz999 Yes

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.